Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802264.1_cds_XP_016478566.1_6981
CDS Infomation

[gene=LOC107799938] [db_xref=GeneID:107799938] [protein=glutamate--cysteine ligase, chloroplastic] [exception=annotated by transcript or proteomic data] [protein_id=XP_016478566.1] [location=join(27724..28049,28634..28784,28994..>29101,<30714..30797,30999..31067,31143..31213,31297..31365,32403..32496,32567..32656,32746..32826,33330..33422,33638..33718,33801..33870,34048..34136)] [gbkey=CDS]
Sequence

ATGGCCTTGATGTCTCAGGCAGGTTCTTCACATTGCATTTACTCTGAAAAGATGAAATGT
ATAAGTGGACACAGCAGCATCACGAGCAATATGGAGATGCTCAAAATGAAGGACATATGC
TTTGGCAATATTTCTTCACGGAATTCCTCAAAACCAATGCAAGGGATTTACTTGGACCGC
GTTGGGGTGGAACGTAGGCGAGGACGCTTGGCAATTGTTGCTGCAAGTCCTCCAACAGAG
GATGCCGTTGTTGCAGCAGAGCCATTAACAAAAGAAGACCTTGTAGCTTATCTTGCTTCT
GGATGCAAATCCAAAGAAAAATGGAGGATAGGCACTGAACATGAAAAGTTTGGTTTCGAG
TTTGGAACTCTGCGACCCATGAAGTATGAACAAATAGCTGAATTACTAAATGGTATTGCC
GAGCGATTTGATTGGGAAAAAGTAATGGAGGGTGACAACATTATTGGCTTGAAACAGGGA
AAGCAAAGCATATCACTGGAACCTGGTGGTCAGTTTGAGCTTAGTGGTGCACCACTTGAA
ACACTGCATCAAACTTGTGCAGAGGTTAATTCACATCTTTACCAGGGGAGATACGAGATT
ATGAGAAATTACATGCCCAAAGTTGGCTCACTTGGGCTAGATATGATGTTTAGAACATGC
ACTGTTCAGGTAAATCTGGACTTCAGTTCTGAAGCTGACATGATCAGAAAGTTTCGTGCT
GGTCTTGCCTTGCAGCCTATTGCTACAGCTCTCTTTGCTAATTCACCTTTCACTGAAGGA
AAACCTAATGGTTATCTCAGCATGAGAAGCCACATTTGGACCGATACAGATAATAACCGT
GCCGGGATGCTTCCCTTCGTCTTTGATGACTCTTTTGGGTTTGAGCAGTATGTGGATTAT
GCACTTGACGTCCCTATGTATTTTGTCTATCGGAAGAAGAAGTATATTGATTGTGCTGGA
ATGTCTTTCCGGGACTTCATGAATGGAAAACTTTCCCCTATTCCCGGCGACTACCCTACT
CTTAATGATTGGGAGAATCACCTCACAACAATATTTCCTGAGGTGAGACTCAAAAGATAT
CTGGAAATGCGAGGTGCCGATGGAGGACCTTGGAGAAGGTTGTGTGCATTGCCTGCATTC
TGGGTGGGTATACTCTACGATGAGGTGTCTTTGCAAACCGTTTTGGATATGACGTCTGAT
TGGACTGCAGAAGAAAGAGAGATGTTGAGGAATAAGGTGCCAACCAGCGGTTTGAAGACA
CCATTTCGAGATGGATTGCTTAAGCATGTTGCTCAAGATGTTGTCAAGTTGGCAAAGGAA
GGCTTGGAGAGAAGAGGCTATAAGGAAACAGGATTTTTGAACGAAGTAACCGAGGTAGTC
AGAACAGGTGTAACACCAGCTGAGAAGCTCCTGGAATTGTACCATGGGAAGTGGGGACGA
AGCGTGGATCCAGTCTTTGAGGAGCTTCTCTACTGA

Peptide Sequence

PEP ID

XP_016478566.1
PEP Infomation

PREDICTED: glutamate--cysteine ligase, chloroplastic [Nicotiana tabacum]
Sequence

MALMSQAGSSHCIYSEKMKCISGHSSITSNMEMLKMKDICFGNISSRNSSKPMQGIYLDR
VGVERRRGRLAIVAASPPTEDAVVAAEPLTKEDLVAYLASGCKSKEKWRIGTEHEKFGFE
FGTLRPMKYEQIAELLNGIAERFDWEKVMEGDNIIGLKQGKQSISLEPGGQFELSGAPLE
TLHQTCAEVNSHLYQVKAVAEEMGIGFLGTGFQPKWGLKDIPVMPKGRYEIMRNYMPKVG
SLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMR
SHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFMNG
KLSPIPGDYPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGILYDEV
SLQTVLDMTSDWTAEEREMLRNKVPTSGLKTPFRDGLLKHVAQDVVKLAKEGLERRGYKE
TGFLNEVTEVVRTGVTPAEKLLELYHGKWGRSVDPVFEELLY

Transcript Sequence

Gene sequence data has not been registered.